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Experiment blazes a trail for growing stem cells in space

Space: The final frontier … for stem cells? Seattle’s Allen Institute for Cell Science says cells from its collection are going into space for the first time on a private mission to the International Space Station.

The Allen Cell Collection’s assortment of human induced pluripotent stem cells, or IPSCs, will be the focus for one of more than 20 experiments being sent into orbit on a flight organized by Texas-based Axiom Space.

Former NASA astronaut Peggy Whitson will command the Ax-2 mission — Axiom’s second trip to the space station — and her crewmates will include Tennessee business executive John Shoffner as well as Saudi astronauts Ali Alqarni and Rayyanah Barnawi.

SpaceX’s Falcon 9 rocket will loft the crew into orbit in a SpaceX Crew Dragon capsule for what’s expected to be a weeklong stay on the station. Liftoff is set for May 21 at 5:37 p.m. ET (2:37 p.m. PT) at NASA’s Kennedy Space Center in Florida. The fare for each rider on last year’s Ax-1 mission was around $55 million, and although the ticket price for Ax-2 hasn’t been announced, it’s probably in a similar range.

The stem-cell study is part of a series of NASA-funded experiments led by researchers at Cedars-Sinai Medical Center in Los Angeles. This experiment is expected to break new ground when it comes to growing IPSCs in space and modifying the cells’ DNA for therapeutic purposes.

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Stem cells help fix damaged hearts in monkeys

Heart stem cells
Heart cells grown in the lab from human embryonic stem cells can restore lost heart function for macaque monkeys. Will they do the same for humans? (UW Medicine via YouTube)

Medical researchers have restored the function of damaged hearts in macaque monkeys, using heart muscle cells derived from human embryonic stem cells. Now they want to do the same for humans.

The technique, detailed today in the journal Nature Biotechnology, could go into human clinical trials as early as 2020, said senior study author Charles Murry, director of the Institute for Stem Cell and Regenerative Medicine at the University of Washington School of Medicine.

“I’ve been in research since 1984, and this worked better than anything I’ve ever seen for the treatment of heart failure,” he told GeekWire.

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How robots and mini-organs can save real humans

Kidney organoids
This is a bird’s-eye view of a microwell plate containing kidney organoids that were produced from human stem cells by a robotic system. The yellow boxed region is shown at higher magnification to reveal individual organoids. Red, green and yellow colors mark distinct segments of 3-D kidney tissue. (UW Medicine Photo / Freedman Lab)

Good news, everybody: Robots can now create human mini-organs from stem cells. What could possibly go wrong?

The method may sound like a nightmare from HBO’s AI thriller “WestWorld,” but researchers from the University of Washington School of Medicine say it really is good news.

“This is a new ‘secret weapon’ in our fight against disease,” Benjamin Freedman, a medical researcher at the UW Institute for Stem Cell and Regenerative Medicine and the Kidney Research Institute, said in a news release.

The robotic system could accelerate the production and use of organ tissues that don’t have to be cut out of an actual human but are nevertheless suitable for research and drug discovery. The system is described in a study published online today in the journal Cell Stem Cell.

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Biologists use AI to flesh out cell’s inner workings

3-D cell model
A 3-D view of human cells is color-coded to highlight substructures. (Allen Institute for Cell Science)

What happens when you cross cell biology with artificial intelligence? At the Allen Institute for Cell Science, the answer isn’t super-brainy microbes, but new computer models that can turn simple black-and-white pictures of live human cells into color-coded, 3-D visualizations filled with detail.

The online database, known as the Allen Integrated Cell, is now being made publicly available — and its creators say it could open up new windows into the workings of our cells.

“From a single, simple microscopy image, you could get this very high-contrast, integrated 3-D image where it’s very easy to see where all the separate structures are,” Molly Maleckar, director of modeling at the Seattle-based Allen Institute, told GeekWire.

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Get a colorful 3-D view of human stem cells

3-D stem cell
A color-coded visualization shows a human stem cell as its nucleus undergoes mitosis and segmentation. (Allen Institute for Cell Science)

Imagine being able to see inside a transparent human stem cell, like the “Visible Man and Woman” models in biology class. That’s what the Seattle-based Allen Institute for Cell Science lets you do with its brand-new data imaging platform, the Allen Cell Explorer.

The cells you see on the screen aren’t made-up animations: They’re based on an analysis of high-quality photomicrographs documenting more than 6,000 induced pluripotent stem cells, or IPS cells, derived from human skin cells.

The IPS cells underwent gene editing to attach fluorescent markers to 11 different types of structures that make up the cells’ machinery – and that’s not all. The institute then applied deep-learning computational methods to predict the complete structure of each cell, based on their glowing patterns.

“This is the first time researchers have used deep learning to try and understand the elusive question of how actual cells are organized,” Rick Horwitz, the institute’s executive director, said in a news release.

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Genes edited to create color-coded stem cells

Stem cell
A cluster of human induced pluripotent stem cells contains dyes that highlight cell membranes (purple) and DNA in the nucleus (blue). Spindles from microtubules, shown in white at the center of the image, aid in cell division. (Allen Institute for Cell Science Photo)

Researchers in Seattle have taken advantage of two of the hottest trends in biotech – cell reprogramming and CRISPR/Cas9 gene editing – to create human stem cells that glow as they turn into different tissue types.

The Allen Institute for Cell Science is making the genetically modified cells available to researchers around the world, with the aim of unlocking the secrets behind cell development.

“These are the first five cell lines in a collection of about 20 that we hope to be releasing in the next year,” Susanne Rafelski, the institute’s director of assay development, told GeekWire in advance of today’s unveiling of the Allen Cell Collection.

The institute’s executive director, Rick Horwitz, explained that each of the millions of cells in our body is like a city, with resources that move around from where they’re made to where they’re used.

“With these cell lines, we aim to give the cell science community a kind of live traffic map, to see when and where the parts of the cell are with the clarity and consistency they need to make progress toward understanding human health and tackling disease,” he said in a news release.

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Five science tales that aren’t April Fool’s jokes

Image: Elasmotherium
A painting by Heinrich Harder (circa 1920) provides a view of Elasmotherium, a horned animal that went extinct tens of thousands of years ago. (Credit: Heinrich Harder via Wikipedia)

Unicorns are real! Scientists propose cloaking device to protect Earth from aliens! Glow-in-the-dark skin grown in lab! Those may sound like April Fool’s headlines, but they’re actually amped-up twists on real-life science. Check out five recent scientific revelations that take a walk on the weird side.

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